Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm11543-201ENSMUST00000120758 370 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Mir1895-201ENSMUST00000122615 79 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm11025-201ENSMUST00000140773 466 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm45747-201ENSMUST00000212203 999 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav6n-6A0A075B6B2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav6n-6A0A075B6B2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm10175-201ENSMUST00000086013 645 ntBASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.27□□□□□ -0.77
Trav6n-6A0A075B6B2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.26□□□□□ -0.77
Trav6n-6A0A075B6B2 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms