Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Gm5687-201ENSMUST00000118252 640 ntBASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Gm10012-201ENSMUST00000078252 192 ntBASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcb1Q9Z0H3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gm6152-201ENSMUST00000151704 340 ntBASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcb1Q9Z0H3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms