Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim3Q9R1R2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm15653-201ENSMUST00000119247 907 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm14057-201ENSMUST00000120631 482 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm12151-201ENSMUST00000121374 290 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Mir1897-201ENSMUST00000122581 272 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm27321-201ENSMUST00000185021 205 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 AA619741-201ENSMUST00000195095 646 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm7775-201ENSMUST00000218871 853 ntBASIC12.98□□□□□ -0.33
Trim3Q9R1R2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim3Q9R1R2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.97□□□□□ -0.33
Trim3Q9R1R2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.97□□□□□ -0.33
Trim3Q9R1R2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 BC001981-202ENSMUST00000191393 1545 ntBASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim3Q9R1R2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim3Q9R1R2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms