Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.43□□□□□ -0.26
Cdh17Q9R100 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Gm15460-201ENSMUST00000118147 391 ntBASIC13.43□□□□□ -0.26
Cdh17Q9R100 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Gm21470-201ENSMUST00000187680 696 ntBASIC13.43□□□□□ -0.26
Cdh17Q9R100 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.43□□□□□ -0.26
Cdh17Q9R100 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.43□□□□□ -0.26
Cdh17Q9R100 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cdh17Q9R100 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Mir449b-201ENSMUST00000104833 80 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 Shd-206ENSMUST00000225145 998 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.42□□□□□ -0.26
Cdh17Q9R100 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh17Q9R100 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.41□□□□□ -0.26
Cdh17Q9R100 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Gm27533-201ENSMUST00000183800 152 ntBASIC13.41□□□□□ -0.26
Cdh17Q9R100 Gm5312-201ENSMUST00000203728 547 ntBASIC13.41□□□□□ -0.26
Cdh17Q9R100 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh17Q9R100 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms