Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Gm37042-201ENSMUST00000193816 581 ntBASIC16.05■□□□□ 0.16
Scn11aQ9R053 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.05■□□□□ 0.16
Scn11aQ9R053 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn11aQ9R053 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.04■□□□□ 0.16
Scn11aQ9R053 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn11aQ9R053 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm22334-201ENSMUST00000158070 133 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm22902-201ENSMUST00000158488 302 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm6222-202ENSMUST00000182143 629 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm3890-201ENSMUST00000182416 207 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.03■□□□□ 0.16
Scn11aQ9R053 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn11aQ9R053 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn11aQ9R053 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms