Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Gm44855-201ENSMUST00000205725 362 ntBASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Gm7730-201ENSMUST00000212486 454 ntBASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ldb3Q9JKS4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm27437-201ENSMUST00000183429 107 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Mir6977-201ENSMUST00000184960 64 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm28760-201ENSMUST00000185995 736 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm42612-201ENSMUST00000197986 623 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm43170-201ENSMUST00000199827 612 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm44487-201ENSMUST00000205145 325 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb3Q9JKS4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Gm27772-201ENSMUST00000184900 187 ntBASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Gm5279-201ENSMUST00000199575 745 ntBASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Gm6218-201ENSMUST00000219812 628 ntBASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb3Q9JKS4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms