Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hmgn3Q9DCB1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm7153-201ENSMUST00000117092 455 ntBASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm7862-201ENSMUST00000121461 292 ntBASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgn3Q9DCB1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn3Q9DCB1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms