Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdc40Q9DC48 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Gm6745-201ENSMUST00000199216 526 ntBASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Acot6-202ENSMUST00000222921 3622 ntBASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdc40Q9DC48 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Gm23984-201ENSMUST00000157139 203 ntBASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Gm6916-202ENSMUST00000205523 195 ntBASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.8□□□□□ -0.36
Cdc40Q9DC48 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdc40Q9DC48 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdc40Q9DC48 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms