Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Gm6912-201ENSMUST00000117218 544 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Gm8410-201ENSMUST00000117225 605 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Gm15393-201ENSMUST00000120499 219 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc7Q9D541 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gm12585-201ENSMUST00000117307 290 ntBASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.1■□□□□ 0.17
Ccdc7Q9D541 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm15240-201ENSMUST00000118156 720 ntBASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm24420-201ENSMUST00000176676 59 ntBASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm27618-201ENSMUST00000183671 60 ntBASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc7Q9D541 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms