Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.71□□□□□ -0.21
Cdh23Q99PF4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Gm18893-201ENSMUST00000198416 943 ntBASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdh23Q99PF4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Gm45224-201ENSMUST00000208203 414 ntBASIC13.7□□□□□ -0.22
Cdh23Q99PF4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdh23Q99PF4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Gm44967-201ENSMUST00000207047 631 ntBASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Gm37042-201ENSMUST00000193816 581 ntBASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Gm12029-201ENSMUST00000120073 832 ntBASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh23Q99PF4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gm13047-201ENSMUST00000117116 815 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.68□□□□□ -0.22
Cdh23Q99PF4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms