Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Mir1895-201ENSMUST00000122615 79 ntBASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gm18889-201ENSMUST00000174284 929 ntBASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.99□□□□□ -0.33
Nkd1Q99MH6 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.99□□□□□ -0.33
Nkd1Q99MH6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkd1Q99MH6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 BC001981-202ENSMUST00000191393 1545 ntBASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Gm9824-201ENSMUST00000178707 561 ntBASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Gm44771-201ENSMUST00000206975 626 ntBASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkd1Q99MH6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gm2445-201ENSMUST00000182798 989 ntBASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkd1Q99MH6 Gm45453-201ENSMUST00000211758 853 ntBASIC12.97□□□□□ -0.33
Nkd1Q99MH6 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms