Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdk5rap3Q99LM2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdk5rap3Q99LM2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdk5rap3Q99LM2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Gm44335-201ENSMUST00000196879 141 ntBASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Gm44297-201ENSMUST00000198304 141 ntBASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Gm44346-201ENSMUST00000198851 141 ntBASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdk5rap3Q99LM2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms