Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.56□□□□□ -0.4
Lims1Q99JW4 Gm43125-201ENSMUST00000201724 730 ntBASIC12.56□□□□□ -0.4
Lims1Q99JW4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.56□□□□□ -0.4
Lims1Q99JW4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.56□□□□□ -0.4
Lims1Q99JW4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims1Q99JW4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Auts2-212ENSMUST00000178555 309 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm6916-202ENSMUST00000205523 195 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.55□□□□□ -0.4
Lims1Q99JW4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lims1Q99JW4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm22065-201ENSMUST00000103753 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm22066-201ENSMUST00000103761 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm24932-201ENSMUST00000103763 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm24115-201ENSMUST00000103799 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm22190-201ENSMUST00000103827 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm22191-201ENSMUST00000103831 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm24721-201ENSMUST00000103849 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm28018-201ENSMUST00000103869 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm26399-201ENSMUST00000103937 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm25349-201ENSMUST00000177728 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm23616-201ENSMUST00000177797 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm25871-201ENSMUST00000177816 110 ntBASIC12.54□□□□□ -0.4
Lims1Q99JW4 Gm24752-201ENSMUST00000178240 110 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms