Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Gm14140-201ENSMUST00000119999 995 ntBASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Gm44492-201ENSMUST00000197012 141 ntBASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Nudcd3Q8R1N4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nudcd3Q8R1N4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nudcd3Q8R1N4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nudcd3Q8R1N4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms