Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rftn2Q8CHX7 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.58□□□□□ -0.07
Rftn2Q8CHX7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rftn2Q8CHX7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm13612-201ENSMUST00000119276 390 ntBASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm27839-201ENSMUST00000184242 106 ntBASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rftn2Q8CHX7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm12403-201ENSMUST00000121384 959 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm38671-201ENSMUST00000200573 130 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm6266-201ENSMUST00000203844 806 ntBASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rftn2Q8CHX7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms