Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm22065-201ENSMUST00000103753 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm22066-201ENSMUST00000103761 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24932-201ENSMUST00000103763 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24115-201ENSMUST00000103799 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm22190-201ENSMUST00000103827 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm22191-201ENSMUST00000103831 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24721-201ENSMUST00000103849 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm28018-201ENSMUST00000103869 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm26399-201ENSMUST00000103937 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Mir449b-201ENSMUST00000104833 80 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm25349-201ENSMUST00000177728 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm23616-201ENSMUST00000177797 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm25871-201ENSMUST00000177816 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24752-201ENSMUST00000178240 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24496-201ENSMUST00000178287 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm25649-201ENSMUST00000178476 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm25548-201ENSMUST00000178681 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm23147-201ENSMUST00000178841 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm26095-201ENSMUST00000179270 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm22171-201ENSMUST00000179283 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm23936-201ENSMUST00000179354 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm22619-201ENSMUST00000179516 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm25255-201ENSMUST00000179579 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24755-201ENSMUST00000179691 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm26506-201ENSMUST00000179692 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm25086-201ENSMUST00000179931 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm23243-201ENSMUST00000180047 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24659-201ENSMUST00000180212 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm24169-201ENSMUST00000180244 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm23689-201ENSMUST00000180354 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm27359-201ENSMUST00000184153 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm27785-201ENSMUST00000184268 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm27466-201ENSMUST00000184396 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm27703-201ENSMUST00000184836 110 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc87Q8CDL9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Gm15920-201ENSMUST00000118998 402 ntBASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Gm25948-201ENSMUST00000175334 112 ntBASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc87Q8CDL9 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.61□□□□□ -0.07
Ccdc87Q8CDL9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms