Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.36□□□□□ -0.27
SynpoQ8CC35 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm14042-201ENSMUST00000120139 833 ntBASIC13.36□□□□□ -0.27
SynpoQ8CC35 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.36□□□□□ -0.27
SynpoQ8CC35 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.36□□□□□ -0.27
SynpoQ8CC35 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SynpoQ8CC35 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Gm4875-201ENSMUST00000118257 786 ntBASIC13.35□□□□□ -0.27
SynpoQ8CC35 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Gm9229-201ENSMUST00000222777 126 ntBASIC13.35□□□□□ -0.27
SynpoQ8CC35 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Gm20445-201ENSMUST00000061905 565 ntBASIC13.35□□□□□ -0.27
SynpoQ8CC35 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SynpoQ8CC35 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Gm15321-201ENSMUST00000121290 288 ntBASIC13.34□□□□□ -0.27
SynpoQ8CC35 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 AA619741-201ENSMUST00000195095 646 ntBASIC13.34□□□□□ -0.27
SynpoQ8CC35 Mir125a-201ENSMUST00000083545 68 ntBASIC13.34□□□□□ -0.27
SynpoQ8CC35 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SynpoQ8CC35 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SynpoQ8CC35 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SynpoQ8CC35 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms