Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Gm15770-201ENSMUST00000117498 584 ntBASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Gm11524-201ENSMUST00000119349 807 ntBASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Gm5161-201ENSMUST00000075243 853 ntBASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gm25925-201ENSMUST00000158314 306 ntBASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gm28631-201ENSMUST00000190740 334 ntBASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gm17330-201ENSMUST00000221047 165 ntBASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Usp44Q8C2S0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp44Q8C2S0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Usp44Q8C2S0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Usp44Q8C2S0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm12485-201ENSMUST00000119641 291 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Gm12403-201ENSMUST00000121384 959 ntBASIC16.07■□□□□ 0.16
Usp44Q8C2S0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms