Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.98□□□□□ -0.33
Ska3Q8C263 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ska3Q8C263 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.98□□□□□ -0.33
Ska3Q8C263 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Gm20445-201ENSMUST00000061905 565 ntBASIC12.98□□□□□ -0.33
Ska3Q8C263 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ska3Q8C263 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.98□□□□□ -0.33
Ska3Q8C263 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.98□□□□□ -0.33
Ska3Q8C263 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ska3Q8C263 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ska3Q8C263 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Syt7-204ENSMUST00000223586 1344 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Gm2445-201ENSMUST00000182798 989 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 Gm29667-201ENSMUST00000190817 490 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.97□□□□□ -0.33
Ska3Q8C263 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ska3Q8C263 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Ska3Q8C263 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Ska3Q8C263 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.96□□□□□ -0.33
Ska3Q8C263 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.96□□□□□ -0.33
Ska3Q8C263 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm6912-201ENSMUST00000117218 544 ntBASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm25925-201ENSMUST00000158314 306 ntBASIC12.96□□□□□ -0.33
Ska3Q8C263 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.96□□□□□ -0.33
Ska3Q8C263 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm9522-201ENSMUST00000182394 926 ntBASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ska3Q8C263 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.96□□□□□ -0.34
Ska3Q8C263 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ska3Q8C263 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ska3Q8C263 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska3Q8C263 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska3Q8C263 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska3Q8C263 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ska3Q8C263 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ska3Q8C263 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ska3Q8C263 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms