Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm24447-201ENSMUST00000083977 338 ntBASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf2Q8BZT2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sh3rf2Q8BZT2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Gm38671-201ENSMUST00000200573 130 ntBASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh3rf2Q8BZT2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms