Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm25144-201ENSMUST00000179561 110 ntBASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm25352-201ENSMUST00000179815 110 ntBASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm27618-201ENSMUST00000183671 60 ntBASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm27622-201ENSMUST00000183779 60 ntBASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trerf1Q8BXJ2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Gm27631-201ENSMUST00000184163 466 ntBASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Gm28630-201ENSMUST00000187806 498 ntBASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Gm38294-201ENSMUST00000192831 381 ntBASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trerf1Q8BXJ2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trerf1Q8BXJ2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trerf1Q8BXJ2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms