Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpsf4Q8BQZ5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gm14057-201ENSMUST00000120631 482 ntBASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cpsf4Q8BQZ5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Gm14767-201ENSMUST00000121559 586 ntBASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Gm12882-201ENSMUST00000121696 517 ntBASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4Q8BQZ5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 BC001981-202ENSMUST00000191393 1545 ntBASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpsf4Q8BQZ5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms