Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trnp1Q80ZI1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trnp1Q80ZI1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trnp1Q80ZI1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trnp1Q80ZI1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trnp1Q80ZI1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trnp1Q80ZI1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Gm12176-201ENSMUST00000121420 875 ntBASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Gm24548-201ENSMUST00000158650 108 ntBASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trnp1Q80ZI1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gm16202-201ENSMUST00000117532 544 ntBASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gm16479-201ENSMUST00000121706 932 ntBASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gm5781-201ENSMUST00000219792 443 ntBASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trnp1Q80ZI1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Gm19163-201ENSMUST00000223313 780 ntBASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trnp1Q80ZI1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trnp1Q80ZI1 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.36■□□□□ 0.05
Trnp1Q80ZI1 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.36■□□□□ 0.05
Trnp1Q80ZI1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnp1Q80ZI1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trnp1Q80ZI1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trnp1Q80ZI1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms