Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Usp6nlQ80XC3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Itm2b-204ENSMUST00000228637 783 ntBASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Usp6nlQ80XC3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Gm6013-201ENSMUST00000212264 699 ntBASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Usp6nlQ80XC3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm12203-201ENSMUST00000118235 598 ntBASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm12209-201ENSMUST00000120089 596 ntBASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm4271-201ENSMUST00000174444 973 ntBASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm27682-201ENSMUST00000183930 110 ntBASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Gm17330-201ENSMUST00000221047 165 ntBASIC15.14■□□□□ 0.01
Usp6nlQ80XC3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms