Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Gm9002-201ENSMUST00000178437 499 ntBASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Gm27701-201ENSMUST00000184498 110 ntBASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Gm28911-201ENSMUST00000188837 117 ntBASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh8Q7TSK3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh8Q7TSK3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh8Q7TSK3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.57□□□□□ -0.24
Pcdh8Q7TSK3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms