Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3d21Q7TSG5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Gm4875-201ENSMUST00000118257 786 ntBASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Mir497b-201ENSMUST00000093601 125 ntBASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh3d21Q7TSG5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Sh3d21Q7TSG5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Gm12151-201ENSMUST00000121374 290 ntBASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Gm4804-201ENSMUST00000182234 999 ntBASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Gm27989-201ENSMUST00000184721 107 ntBASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh3d21Q7TSG5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Sh3d21Q7TSG5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms