Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmgb4Q6P8W9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Gm15824-201ENSMUST00000119516 955 ntBASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Gm15806-201ENSMUST00000120696 955 ntBASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Gm5279-201ENSMUST00000199575 745 ntBASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmgb4Q6P8W9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmgb4Q6P8W9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms