Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.76□□□□□ -0.37
AtmQ62388 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
AtmQ62388 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.76□□□□□ -0.37
AtmQ62388 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AtmQ62388 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
AtmQ62388 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
AtmQ62388 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
AtmQ62388 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.75□□□□□ -0.37
AtmQ62388 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gm15276-201ENSMUST00000145953 498 ntBASIC12.75□□□□□ -0.37
AtmQ62388 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gm28450-201ENSMUST00000187349 638 ntBASIC12.75□□□□□ -0.37
AtmQ62388 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.75□□□□□ -0.37
AtmQ62388 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gm13097-201ENSMUST00000210722 397 ntBASIC12.75□□□□□ -0.37
AtmQ62388 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gm10434-201ENSMUST00000101158 471 ntBASIC12.75□□□□□ -0.37
AtmQ62388 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Gm38317-201ENSMUST00000195564 343 ntBASIC12.75□□□□□ -0.37
AtmQ62388 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
AtmQ62388 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AtmQ62388 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.74□□□□□ -0.37
AtmQ62388 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.74□□□□□ -0.37
AtmQ62388 Gm2231-201ENSMUST00000125661 612 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Gm27552-201ENSMUST00000183351 62 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Gm27844-201ENSMUST00000183613 62 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.74□□□□□ -0.37
AtmQ62388 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.74□□□□□ -0.37
AtmQ62388 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
AtmQ62388 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
AtmQ62388 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.74□□□□□ -0.37
AtmQ62388 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Gm11597-201ENSMUST00000121423 964 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.74□□□□□ -0.37
AtmQ62388 Gm44967-201ENSMUST00000207047 631 ntBASIC12.74□□□□□ -0.37
AtmQ62388 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.74□□□□□ -0.37
AtmQ62388 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
AtmQ62388 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.74□□□□□ -0.37
AtmQ62388 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AtmQ62388 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
AtmQ62388 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
AtmQ62388 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Gm30285-201ENSMUST00000214614 422 ntBASIC12.73□□□□□ -0.37
AtmQ62388 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
AtmQ62388 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AtmQ62388 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms