Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Gm5161-201ENSMUST00000075243 853 ntBASIC14.32□□□□□ -0.12
Smarcd1Q61466 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd1Q61466 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Gm24447-201ENSMUST00000083977 338 ntBASIC14.31□□□□□ -0.12
Smarcd1Q61466 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd1Q61466 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.3□□□□□ -0.12
Smarcd1Q61466 Gm11478-201ENSMUST00000117851 599 ntBASIC14.3□□□□□ -0.12
Smarcd1Q61466 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcd1Q61466 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms