Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mre11Q61216 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Mre11Q61216 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC16.51■□□□□ 0.23
Mre11Q61216 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Mre11Q61216 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Mre11Q61216 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Mre11Q61216 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Mre11Q61216 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.5■□□□□ 0.23
Mre11Q61216 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.5■□□□□ 0.23
Mre11Q61216 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.5■□□□□ 0.23
Mre11Q61216 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.5■□□□□ 0.23
Mre11Q61216 Gm44608-201ENSMUST00000206827 855 ntBASIC16.5■□□□□ 0.23
Mre11Q61216 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.5■□□□□ 0.23
Mre11Q61216 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Mre11Q61216 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC16.49■□□□□ 0.23
Mre11Q61216 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Mre11Q61216 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mre11Q61216 Gm4899-201ENSMUST00000178708 719 ntBASIC16.49■□□□□ 0.23
Mre11Q61216 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Mre11Q61216 Gm44719-201ENSMUST00000206404 149 ntBASIC16.49■□□□□ 0.23
Mre11Q61216 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
Mre11Q61216 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.49■□□□□ 0.23
Mre11Q61216 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mre11Q61216 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mre11Q61216 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Mre11Q61216 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Mre11Q61216 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.48■□□□□ 0.23
Mre11Q61216 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Mre11Q61216 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Gm7222-201ENSMUST00000117512 906 ntBASIC16.48■□□□□ 0.23
Mre11Q61216 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mre11Q61216 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.47■□□□□ 0.23
Mre11Q61216 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.47■□□□□ 0.23
Mre11Q61216 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Mre11Q61216 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Mre11Q61216 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.47■□□□□ 0.23
Mre11Q61216 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.47■□□□□ 0.23
Mre11Q61216 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Gm37720-201ENSMUST00000195497 1241 ntBASIC16.47■□□□□ 0.23
Mre11Q61216 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.47■□□□□ 0.23
Mre11Q61216 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Gm37269-201ENSMUST00000193906 1891 ntBASIC16.47■□□□□ 0.23
Mre11Q61216 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Mre11Q61216 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Mre11Q61216 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mre11Q61216 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Mre11Q61216 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.47■□□□□ 0.23
Mre11Q61216 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms