Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.24□□□□□ -0.29
ClpbQ60649 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ClpbQ60649 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.24□□□□□ -0.29
ClpbQ60649 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ClpbQ60649 Gm7730-201ENSMUST00000212486 454 ntBASIC13.24□□□□□ -0.29
ClpbQ60649 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ClpbQ60649 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ClpbQ60649 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.24□□□□□ -0.29
ClpbQ60649 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ClpbQ60649 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.23□□□□□ -0.29
ClpbQ60649 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Syt7-204ENSMUST00000223586 1344 ntBASIC13.23□□□□□ -0.29
ClpbQ60649 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Gm15957-201ENSMUST00000118893 974 ntBASIC13.23□□□□□ -0.29
ClpbQ60649 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.23□□□□□ -0.29
ClpbQ60649 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClpbQ60649 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ClpbQ60649 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ClpbQ60649 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.23□□□□□ -0.29
ClpbQ60649 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ClpbQ60649 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ClpbQ60649 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClpbQ60649 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.22□□□□□ -0.29
ClpbQ60649 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.22□□□□□ -0.29
ClpbQ60649 Gm16215-201ENSMUST00000161990 637 ntBASIC13.22□□□□□ -0.29
ClpbQ60649 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Gm24694-201ENSMUST00000180054 110 ntBASIC13.22□□□□□ -0.29
ClpbQ60649 Gm27663-201ENSMUST00000184839 110 ntBASIC13.22□□□□□ -0.29
ClpbQ60649 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.22□□□□□ -0.29
ClpbQ60649 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.22□□□□□ -0.29
ClpbQ60649 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.22□□□□□ -0.29
ClpbQ60649 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ClpbQ60649 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ClpbQ60649 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
ClpbQ60649 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ClpbQ60649 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ClpbQ60649 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms