Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps54Q5SPW0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps54Q5SPW0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps54Q5SPW0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Gm13689-201ENSMUST00000119360 685 ntBASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps54Q5SPW0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm5745-201ENSMUST00000183748 313 ntBASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.49■□□□□ 0.23
Vps54Q5SPW0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps54Q5SPW0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms