Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim41Q5NCC3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Gm22323-201ENSMUST00000103832 109 ntBASIC23.78■■□□□ 1.4
Trim41Q5NCC3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Gm7895-201ENSMUST00000187459 1173 ntBASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim41Q5NCC3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm5687-201ENSMUST00000118252 640 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm4819-201ENSMUST00000182170 1009 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm9124-201ENSMUST00000191789 1092 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm9113-201ENSMUST00000192510 1018 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm9131-201ENSMUST00000193557 1089 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm9121-201ENSMUST00000193749 1071 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gm17330-201ENSMUST00000221047 165 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim41Q5NCC3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Gm24644-201ENSMUST00000157114 139 ntBASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Mir5120-201ENSMUST00000175020 78 ntBASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Gm2445-201ENSMUST00000182798 989 ntBASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Gm37008-201ENSMUST00000195712 319 ntBASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Gm45504-201ENSMUST00000211407 2107 ntBASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Trim41Q5NCC3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms