Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Gm8885-201ENSMUST00000189382 598 ntBASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps13aQ5H8C4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps13aQ5H8C4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Vps13aQ5H8C4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps13aQ5H8C4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps13aQ5H8C4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps13aQ5H8C4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm13665-201ENSMUST00000120830 528 ntBASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm19459-201ENSMUST00000176240 835 ntBASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.33□□□□□ -0.28
Vps13aQ5H8C4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gm37042-201ENSMUST00000193816 581 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gm9555-201ENSMUST00000200908 583 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gm11531-201ENSMUST00000117614 555 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.32□□□□□ -0.28
Vps13aQ5H8C4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms