Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.04■□□□□ 0.32
Usp48Q3V0C5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp48Q3V0C5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm12928-201ENSMUST00000117115 573 ntBASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm15429-201ENSMUST00000151268 798 ntBASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm4804-201ENSMUST00000182234 999 ntBASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp48Q3V0C5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp48Q3V0C5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp48Q3V0C5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp48Q3V0C5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp48Q3V0C5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp48Q3V0C5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp48Q3V0C5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms