Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gm4459-201ENSMUST00000118750 468 ntBASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gm12497-201ENSMUST00000138778 237 ntBASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gm22697-201ENSMUST00000175194 63 ntBASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm13836-201ENSMUST00000121159 501 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm13168-201ENSMUST00000121771 632 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm25745-201ENSMUST00000174945 133 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm44454-201ENSMUST00000198541 138 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cks1brtQ3UNC9 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cks1brtQ3UNC9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms