Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Khdc4Q3TCX3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Khdc4Q3TCX3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Khdc4Q3TCX3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gm10275-202ENSMUST00000168697 495 ntBASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gm8602-201ENSMUST00000184045 607 ntBASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gm25857-201ENSMUST00000082788 129 ntBASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Gm10275-201ENSMUST00000092620 635 ntBASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Khdc4Q3TCX3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms