Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gm27525-201ENSMUST00000184465 107 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.45□□□□□ -0.42
Ccbe1Q3MI99 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccbe1Q3MI99 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.43□□□□□ -0.42
Ccbe1Q3MI99 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms