Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col6a2Q02788 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
Col6a2Q02788 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Gm27772-201ENSMUST00000184900 187 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Gm28911-201ENSMUST00000188837 117 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col6a2Q02788 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col6a2Q02788 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.74□□□□□ -0.21
Col6a2Q02788 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.74□□□□□ -0.21
Col6a2Q02788 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.74□□□□□ -0.21
Col6a2Q02788 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col6a2Q02788 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Gm12485-201ENSMUST00000119641 291 ntBASIC13.73□□□□□ -0.21
Col6a2Q02788 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Gm27701-201ENSMUST00000184498 110 ntBASIC13.73□□□□□ -0.21
Col6a2Q02788 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.73□□□□□ -0.21
Col6a2Q02788 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col6a2Q02788 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.73□□□□□ -0.21
Col6a2Q02788 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.72□□□□□ -0.21
Col6a2Q02788 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.72□□□□□ -0.21
Col6a2Q02788 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.72□□□□□ -0.21
Col6a2Q02788 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.72□□□□□ -0.21
Col6a2Q02788 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col6a2Q02788 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.72□□□□□ -0.21
Col6a2Q02788 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms