Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
PrkdcP97313 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm23949-201ENSMUST00000104027 127 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.13□□□□□ -0.95
PrkdcP97313 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
PrkdcP97313 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.13□□□□□ -0.95
PrkdcP97313 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Nupl1-207ENSMUST00000225311 2475 ntBASIC9.13□□□□□ -0.95
PrkdcP97313 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PrkdcP97313 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 Gm12502-201ENSMUST00000120197 444 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.12□□□□□ -0.95
PrkdcP97313 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.12□□□□□ -0.95
PrkdcP97313 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
PrkdcP97313 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC9.12□□□□□ -0.95
PrkdcP97313 Gm37246-201ENSMUST00000192665 835 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 AY036118-201ENSMUST00000200021 923 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.12□□□□□ -0.95
PrkdcP97313 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
PrkdcP97313 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.12□□□□□ -0.95
PrkdcP97313 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC9.12□□□□□ -0.95
PrkdcP97313 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PrkdcP97313 AC096628.2-201ENSMUST00000225443 1413 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.12□□□□□ -0.95
PrkdcP97313 Gm45550-201ENSMUST00000209380 946 ntBASIC9.12□□□□□ -0.95
PrkdcP97313 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PrkdcP97313 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PrkdcP97313 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Gm11354-201ENSMUST00000121974 422 ntBASIC9.11□□□□□ -0.95
PrkdcP97313 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.11□□□□□ -0.95
PrkdcP97313 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.11□□□□□ -0.95
PrkdcP97313 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.11□□□□□ -0.95
PrkdcP97313 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
PrkdcP97313 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PrkdcP97313 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms