Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Gm25144-201ENSMUST00000179561 110 ntBASIC14.2□□□□□ -0.14
Trim43bP86448 Gm25352-201ENSMUST00000179815 110 ntBASIC14.2□□□□□ -0.14
Trim43bP86448 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43bP86448 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.2□□□□□ -0.14
Trim43bP86448 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim43bP86448 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim43bP86448 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim43bP86448 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.19□□□□□ -0.14
Trim43bP86448 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim43bP86448 Gm5479-201ENSMUST00000160578 435 ntBASIC14.19□□□□□ -0.14
Trim43bP86448 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Gm5779-201ENSMUST00000218467 910 ntBASIC14.19□□□□□ -0.14
Trim43bP86448 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.19□□□□□ -0.14
Trim43bP86448 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.19□□□□□ -0.14
Trim43bP86448 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.19□□□□□ -0.14
Trim43bP86448 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim43bP86448 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43bP86448 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.18□□□□□ -0.14
Trim43bP86448 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.18□□□□□ -0.14
Trim43bP86448 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim43bP86448 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Gm45098-201ENSMUST00000207179 657 ntBASIC14.18□□□□□ -0.14
Trim43bP86448 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.18□□□□□ -0.14
Trim43bP86448 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.18□□□□□ -0.14
Trim43bP86448 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trim43bP86448 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43bP86448 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43bP86448 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43bP86448 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms