Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rpl39P62892 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Rpl39P62892 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.82□□□□□ -0.84
Rpl39P62892 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.82□□□□□ -0.84
Rpl39P62892 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Rpl39P62892 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.82□□□□□ -0.84
Rpl39P62892 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rpl39P62892 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Rpl39P62892 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Rpl39P62892 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.81□□□□□ -0.84
Rpl39P62892 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.81□□□□□ -0.84
Rpl39P62892 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.81□□□□□ -0.84
Rpl39P62892 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.81□□□□□ -0.84
Rpl39P62892 Gm12882-201ENSMUST00000121696 517 ntBASIC9.81□□□□□ -0.84
Rpl39P62892 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Rpl39P62892 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.81□□□□□ -0.84
Rpl39P62892 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.81□□□□□ -0.84
Rpl39P62892 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39P62892 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Gm15590-201ENSMUST00000078419 552 ntBASIC9.81□□□□□ -0.84
Rpl39P62892 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Rpl39P62892 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39P62892 AC117194.1-201ENSMUST00000224847 3002 ntBASIC9.81□□□□□ -0.84
Rpl39P62892 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.81□□□□□ -0.84
Rpl39P62892 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39P62892 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.81□□□□□ -0.84
Rpl39P62892 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Gm11452-201ENSMUST00000122376 690 ntBASIC9.8□□□□□ -0.84
Rpl39P62892 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Gm5177-201ENSMUST00000183092 997 ntBASIC9.8□□□□□ -0.84
Rpl39P62892 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.8□□□□□ -0.84
Rpl39P62892 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Rpl39P62892 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.8□□□□□ -0.84
Rpl39P62892 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms