Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdh11P55288 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Cdh11P55288 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.59□□□□□ -0.39
Cdh11P55288 Gm18041-201ENSMUST00000218210 618 ntBASIC12.59□□□□□ -0.39
Cdh11P55288 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdh11P55288 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.59□□□□□ -0.39
Cdh11P55288 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdh11P55288 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.59□□□□□ -0.39
Cdh11P55288 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdh11P55288 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdh11P55288 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cdh11P55288 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Cdh11P55288 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.58□□□□□ -0.4
Cdh11P55288 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cdh11P55288 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh11P55288 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh11P55288 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh11P55288 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.58□□□□□ -0.4
Cdh11P55288 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.58□□□□□ -0.4
Cdh11P55288 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cdh11P55288 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh11P55288 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.58□□□□□ -0.4
Cdh11P55288 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.58□□□□□ -0.4
Cdh11P55288 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdh11P55288 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh11P55288 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.57□□□□□ -0.4
Cdh11P55288 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Cdh11P55288 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cdh11P55288 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.57□□□□□ -0.4
Cdh11P55288 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.57□□□□□ -0.4
Cdh11P55288 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.57□□□□□ -0.4
Cdh11P55288 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.57□□□□□ -0.4
Cdh11P55288 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.57□□□□□ -0.4
Cdh11P55288 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh11P55288 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms