Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nub1P54729 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nub1P54729 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nub1P54729 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.03
Nub1P54729 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Nub1P54729 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Nub1P54729 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nub1P54729 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nub1P54729 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Gm2445-201ENSMUST00000182798 989 ntBASIC14.83□□□□□ -0.04
Nub1P54729 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.83□□□□□ -0.04
Nub1P54729 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.83□□□□□ -0.04
Nub1P54729 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.83□□□□□ -0.04
Nub1P54729 Syt7-204ENSMUST00000223586 1344 ntBASIC14.83□□□□□ -0.04
Nub1P54729 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
Nub1P54729 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nub1P54729 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nub1P54729 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nub1P54729 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.82□□□□□ -0.04
Nub1P54729 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.82□□□□□ -0.04
Nub1P54729 Gm8927-201ENSMUST00000181978 981 ntBASIC14.82□□□□□ -0.04
Nub1P54729 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.82□□□□□ -0.04
Nub1P54729 Gm3222-201ENSMUST00000071282 990 ntBASIC14.82□□□□□ -0.04
Nub1P54729 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nub1P54729 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nub1P54729 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nub1P54729 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nub1P54729 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.81□□□□□ -0.04
Nub1P54729 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.81□□□□□ -0.04
Nub1P54729 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.81□□□□□ -0.04
Nub1P54729 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Gm21854-201ENSMUST00000179901 471 ntBASIC14.81□□□□□ -0.04
Nub1P54729 Gm24694-201ENSMUST00000180054 110 ntBASIC14.81□□□□□ -0.04
Nub1P54729 Gm27663-201ENSMUST00000184839 110 ntBASIC14.81□□□□□ -0.04
Nub1P54729 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.81□□□□□ -0.04
Nub1P54729 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.81□□□□□ -0.04
Nub1P54729 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.81□□□□□ -0.04
Nub1P54729 Gm20445-201ENSMUST00000061905 565 ntBASIC14.81□□□□□ -0.04
Nub1P54729 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nub1P54729 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.81□□□□□ -0.04
Nub1P54729 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms