Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.8□□□□□ -0.2
Fdft1P53798 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Fdft1P53798 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Fdft1P53798 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Fdft1P53798 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Fdft1P53798 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Fdft1P53798 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.79□□□□□ -0.2
Fdft1P53798 Gm16476-201ENSMUST00000221544 139 ntBASIC13.79□□□□□ -0.2
Fdft1P53798 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.79□□□□□ -0.2
Fdft1P53798 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.79□□□□□ -0.2
Fdft1P53798 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.79□□□□□ -0.2
Fdft1P53798 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Fdft1P53798 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Fdft1P53798 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.79□□□□□ -0.2
Fdft1P53798 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Fdft1P53798 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Fdft1P53798 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fdft1P53798 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Fdft1P53798 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.78□□□□□ -0.2
Fdft1P53798 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Fdft1P53798 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Fdft1P53798 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.78□□□□□ -0.2
Fdft1P53798 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Fdft1P53798 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Fdft1P53798 Gm15693-201ENSMUST00000120470 637 ntBASIC13.78□□□□□ -0.2
Fdft1P53798 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Gm25948-201ENSMUST00000175334 112 ntBASIC13.78□□□□□ -0.2
Fdft1P53798 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.78□□□□□ -0.2
Fdft1P53798 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.78□□□□□ -0.2
Fdft1P53798 Gm28630-201ENSMUST00000187806 498 ntBASIC13.78□□□□□ -0.2
Fdft1P53798 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.78□□□□□ -0.2
Fdft1P53798 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.78□□□□□ -0.2
Fdft1P53798 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Fdft1P53798 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.78□□□□□ -0.2
Fdft1P53798 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.78□□□□□ -0.2
Fdft1P53798 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fdft1P53798 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Fdft1P53798 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Fdft1P53798 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Fdft1P53798 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Fdft1P53798 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
Fdft1P53798 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms