Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Acot6-202ENSMUST00000222921 3622 ntBASIC13.62□□□□□ -0.23
Pdx1P52946 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Gm22189-201ENSMUST00000103822 86 ntBASIC13.62□□□□□ -0.23
Pdx1P52946 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.62□□□□□ -0.23
Pdx1P52946 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.62□□□□□ -0.23
Pdx1P52946 Gm44855-201ENSMUST00000205725 362 ntBASIC13.62□□□□□ -0.23
Pdx1P52946 Gm6218-201ENSMUST00000219812 628 ntBASIC13.62□□□□□ -0.23
Pdx1P52946 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.62□□□□□ -0.23
Pdx1P52946 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pdx1P52946 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pdx1P52946 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Gm24420-201ENSMUST00000176676 59 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Gm18905-201ENSMUST00000205454 928 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Gm2423-201ENSMUST00000074863 733 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pdx1P52946 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.61□□□□□ -0.23
Pdx1P52946 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.61□□□□□ -0.23
Pdx1P52946 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pdx1P52946 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.6□□□□□ -0.23
Pdx1P52946 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.6□□□□□ -0.23
Pdx1P52946 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pdx1P52946 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.6□□□□□ -0.23
Pdx1P52946 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pdx1P52946 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.6□□□□□ -0.23
Pdx1P52946 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pdx1P52946 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Gm42612-201ENSMUST00000197986 623 ntBASIC13.6□□□□□ -0.23
Pdx1P52946 Gm43170-201ENSMUST00000199827 612 ntBASIC13.6□□□□□ -0.23
Pdx1P52946 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Gm7730-201ENSMUST00000212486 454 ntBASIC13.6□□□□□ -0.23
Pdx1P52946 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.6□□□□□ -0.23
Pdx1P52946 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pdx1P52946 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms