Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClgnP52194 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClgnP52194 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClgnP52194 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClgnP52194 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClgnP52194 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ClgnP52194 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.08□□□□□ -0.16
ClgnP52194 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Gm6415-201ENSMUST00000118488 348 ntBASIC14.08□□□□□ -0.16
ClgnP52194 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ClgnP52194 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 Gm16476-201ENSMUST00000221544 139 ntBASIC14.08□□□□□ -0.16
ClgnP52194 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Mir125a-201ENSMUST00000083545 68 ntBASIC14.08□□□□□ -0.16
ClgnP52194 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ClgnP52194 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClgnP52194 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
ClgnP52194 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
ClgnP52194 Gm24543-201ENSMUST00000103867 82 ntBASIC14.07□□□□□ -0.16
ClgnP52194 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.07□□□□□ -0.16
ClgnP52194 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Gm28630-201ENSMUST00000187806 498 ntBASIC14.07□□□□□ -0.16
ClgnP52194 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.07□□□□□ -0.16
ClgnP52194 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.07□□□□□ -0.16
ClgnP52194 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ClgnP52194 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.07□□□□□ -0.16
ClgnP52194 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.07□□□□□ -0.16
ClgnP52194 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.07□□□□□ -0.16
ClgnP52194 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClgnP52194 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ClgnP52194 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ClgnP52194 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ClgnP52194 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClgnP52194 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClgnP52194 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.06□□□□□ -0.16
ClgnP52194 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.06□□□□□ -0.16
ClgnP52194 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.06□□□□□ -0.16
ClgnP52194 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.06□□□□□ -0.16
ClgnP52194 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Gm8584-201ENSMUST00000171982 758 ntBASIC14.06□□□□□ -0.16
ClgnP52194 Gm5779-201ENSMUST00000218467 910 ntBASIC14.06□□□□□ -0.16
ClgnP52194 Dupd1-202ENSMUST00000224735 548 ntBASIC14.06□□□□□ -0.16
ClgnP52194 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClgnP52194 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.06□□□□□ -0.16
ClgnP52194 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClgnP52194 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClgnP52194 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms