Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rfx3P48381 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rfx3P48381 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.46□□□□□ -0.41
Rfx3P48381 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.46□□□□□ -0.41
Rfx3P48381 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.46□□□□□ -0.41
Rfx3P48381 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.46□□□□□ -0.41
Rfx3P48381 Gm44608-201ENSMUST00000206827 855 ntBASIC12.46□□□□□ -0.41
Rfx3P48381 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfx3P48381 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rfx3P48381 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rfx3P48381 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rfx3P48381 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfx3P48381 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rfx3P48381 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.46□□□□□ -0.42
Rfx3P48381 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.46□□□□□ -0.42
Rfx3P48381 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rfx3P48381 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rfx3P48381 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Gm13015-201ENSMUST00000118674 204 ntBASIC12.45□□□□□ -0.42
Rfx3P48381 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Gm24158-201ENSMUST00000175263 71 ntBASIC12.45□□□□□ -0.42
Rfx3P48381 Gm43474-201ENSMUST00000196415 774 ntBASIC12.45□□□□□ -0.42
Rfx3P48381 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Rfx3P48381 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Rfx3P48381 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.45□□□□□ -0.42
Rfx3P48381 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rfx3P48381 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.44□□□□□ -0.42
Rfx3P48381 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfx3P48381 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.44□□□□□ -0.42
Rfx3P48381 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfx3P48381 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfx3P48381 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 Gm13823-201ENSMUST00000119930 345 ntBASIC12.44□□□□□ -0.42
Rfx3P48381 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Rfx3P48381 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rfx3P48381 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms