Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Gm25948-201ENSMUST00000175334 112 ntBASIC14.22□□□□□ -0.13
Msh2P43247 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.22□□□□□ -0.13
Msh2P43247 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.22□□□□□ -0.13
Msh2P43247 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.22□□□□□ -0.13
Msh2P43247 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.22□□□□□ -0.13
Msh2P43247 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.22□□□□□ -0.13
Msh2P43247 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Msh2P43247 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Msh2P43247 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.22□□□□□ -0.13
Msh2P43247 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Msh2P43247 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.21□□□□□ -0.13
Msh2P43247 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
Msh2P43247 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.21□□□□□ -0.13
Msh2P43247 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.21□□□□□ -0.13
Msh2P43247 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Msh2P43247 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.21□□□□□ -0.13
Msh2P43247 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.21□□□□□ -0.13
Msh2P43247 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Gm10275-202ENSMUST00000168697 495 ntBASIC14.21□□□□□ -0.13
Msh2P43247 Gm29541-201ENSMUST00000191351 678 ntBASIC14.21□□□□□ -0.13
Msh2P43247 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Gm10275-201ENSMUST00000092620 635 ntBASIC14.21□□□□□ -0.13
Msh2P43247 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Msh2P43247 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Msh2P43247 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.21□□□□□ -0.14
Msh2P43247 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.21□□□□□ -0.14
Msh2P43247 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Msh2P43247 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Msh2P43247 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh2P43247 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Msh2P43247 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Msh2P43247 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Msh2P43247 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Msh2P43247 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.2□□□□□ -0.14
Msh2P43247 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.2□□□□□ -0.14
Msh2P43247 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Msh2P43247 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Msh2P43247 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Msh2P43247 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Msh2P43247 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.2□□□□□ -0.14
Msh2P43247 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Msh2P43247 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Msh2P43247 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Msh2P43247 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Msh2P43247 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Msh2P43247 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.19□□□□□ -0.14
Msh2P43247 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.19□□□□□ -0.14
Msh2P43247 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Gm13616-201ENSMUST00000120600 222 ntBASIC14.19□□□□□ -0.14
Msh2P43247 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.19□□□□□ -0.14
Msh2P43247 Gm18766-201ENSMUST00000189811 808 ntBASIC14.19□□□□□ -0.14
Msh2P43247 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.19□□□□□ -0.14
Msh2P43247 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Msh2P43247 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Msh2P43247 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms