Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm13461-201ENSMUST00000120980 662 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm11964-201ENSMUST00000120982 444 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm12403-201ENSMUST00000121384 959 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.09□□□□□ -0.15
Cxcl12P40224 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.09□□□□□ -0.15
Cxcl12P40224 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cxcl12P40224 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl12P40224 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cxcl12P40224 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.08□□□□□ -0.15
Cxcl12P40224 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Carlr-201ENSMUST00000181515 2574 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm14263-201ENSMUST00000117955 746 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm42997-202ENSMUST00000200321 985 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Morn2-202ENSMUST00000227729 656 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.08□□□□□ -0.16
Cxcl12P40224 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.08□□□□□ -0.16
Cxcl12P40224 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl12P40224 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.07□□□□□ -0.16
Cxcl12P40224 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm8805-201ENSMUST00000117848 313 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 B9d1os-201ENSMUST00000137010 674 ntBASIC14.07□□□□□ -0.16
Cxcl12P40224 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cxcl12P40224 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms